从FASTA到VectorNTI的广泛文件格式兼容性
来自世界各地的大量数据？ 通过简单的拖放导入各种格式，升级到Geneious非常简单。
Geneious,
拖放以导入和转换序列数据
分享您的数据。导入，导出和转换常见文件类型及其注释和注释。
组织，搜索和共享序列数据库
安排和浏览你的数据库你喜欢的。
- 添加和删除序列数据库
- 文档记录自动保存
- 批量导出
- 批量重命名
- 根据字段过滤文档
- 共享带注释的序列文件
- 导出并提交给Genbank
智能NGS文件导入
即使您混合使用不同的样本和参考序列，也可以将一系列SAM，BAM，GFF，BED和VCF文件放入Geneious中，只需轻松一步即可导入。
支持的格式类型
| 格式 | 扩展 | 数 据 类 型 | 共 同 来 源 |
|---|
| BED | *.bed | Annotations | UCSC |
| Common Assembly Format | *.caf | Contigs | Sequencher |
| Clone Manager | *.cm5 | Nucleotide sequences | Clone Manager |
| Clustal | *.aln | Alignments | ClustalX |
| CS FASTA | *.csfasta | Color space | FASTA ABI SOLiD |
| DNAStar | *.seq, *.pro | Nucleotide & protein sequences | DNAStar |
| DNA Strider | *.str | Sequences | DNA Strider |
| Embl/UniProt | *.embl, *.swp | Sequences | Embl, UniProt |
| Endnote (8.0) XML | *.xml | Journal article references | Endnote, Journal article websites |
| FASTA | *.fasta, *.fas, etc. | Sequences, alignments | PAUP*, ClustalX, BLAST, FASTA |
| FASTQ | *.fastq, *.fasq | Sequences with quality | Solexa/Illumina |
| GCG | *.seq | Sequences | GCG, |
| GenBank | *.gb, *.xml | Nucleotide & protein sequences | GenBank |
| Geneious | *.xml, *.geneious | Preferences, databases | Geneious |
| GFF | *.gff | Annotations | Sanger Artemis |
| MEGA | *.meg | Alignments | MEGA |
| Molecular structure | *.pdb, *.mol, *.xyz, *.cml, *.gpr, *.hin, *.nwo | 3D molecular structures | 3D structure databases and programs |
| Newick | *.tre, *.tree, etc. | Phylogenetic trees | PHYLIP, Tree-Puzzle, PAUP*, ClustalX |
| Nexus | *.nxs, *.nex | Trees, Alignments | PAUP*, Mesquite, MrBayes & MacClade |
| PDB | *.pdb | 3D Protein structures | SP3, SP2, SPARKS, Protein Data Bank |
| Documents, presentations | Adobe Writer, LATEX, Miktex | ||
| Phrap ACE | *.ace | Contig assemblies | Phrap/Consed |
| PileUp | *.msf | Alignments pileup | (gcg) |
| PIR/NBRF | *.pir | Sequences, alignments | NBRF PIR |
| Qual | *.qual | Quality file | Associated with a FASTA file |
| Raw sequence text | *.seq | Sequences | Any file that contains only a sequence, |
| Rich Sequence Format | *.rsf | Sequences, alignments | GCGs NetFetch |
| Comma/Tab Separated Values | *.csv, *.tsv | Spreadsheet files | Microsoft Excel |
| SAM/BAM | *.sam, *.bam | Contigs | SAMtools |
| Sequence Chromatograms | *.ab1, *.scf | Raw sequencing trace & sequence | Sequencing machines |
| SnapGene | *.dna | Sequences, annotations, metadata | SnapGene |
| Variant Call Format | *.vcf | Variant calls/SNPs | Variant callers and databases |
| Vector NTI sequence | *.gb, *.gp | Nucleotide & protein sequences | Vector NTI |
| Vector NTI/AlignX alignment | *.apr | Alignments | Vector NTI, AlignX |
| Vector NTI Archive | *.ma4, *.pa4, *.oa4, *.ea4, *.ca6 | Nucleotide & protein sequences, enzyme sets and publications | Vector NTI |
| Vector NTI/ContigExpress | *.cep | Nucleotide sequence assemblies | Vector NTI |
| Vector NTI database | VNTI Database | Nucleotide & protein sequences, enzyme sets and publications | Vector NTI |
导出格式选项
任何一组文档都可以以Geneious native格式导出。
| 数据类型 | 格式 |
|---|---|
| DNA序列 | FASTA，Genbank XML，Genebank，Geneious |
| 氨基酸序列 | FASTA，Genbank XML，Genebank，Geneious |
| 色谱图序列 | ABI，Geneious |
| 有质量的序列 | FastQ，Qual，Geneious |
| 注解 | GFF，BED，VCF，Geneious |
| 多序列比对 | Phylip，FASTA，NEXUS，MEGA3，Geneious |
| 部件 | Phrap ACE，Geneious，SAM / BAM，Geneious |
| 系统发育树 | Phylip，FASTA，NEXUS，Newick，MEGA3，Geneious |
| PDF文件 | PDF，Geneious |
| 出版物 | EndNote 8.0，Geneious |
| 图表 | CSV或WIG或图像 |